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micro cumulative final review

front 1

All cellular organisms are classified as

A. Bacteria

B. Archaea

C. Eukarya

back 1

All three are cellular organism classifications.

front 2

Protists contain all of the following forms of life except

A.protozoa

B.fungi

C.slime molds

D.algae

E. amoeba

back 2

fungi

front 3

True or False: Viruses are not generally studied by microbiologists because they are not classified as living organisms

back 3

False

front 4

True or False: Prokaryotes have a relatively complex morphology and a true,membrane-delimited nucleus.

back 4

False

front 5

Which of the following distinguish the field of microbiology from other fields of biology?

A.The size of the organism studied.

B.The techniques used to study organisms regardless of their size.

C.Both the size of the organism studied and the techniques employed in the study of organisms.

D.Neither the size of the organism studied nor the techniques employed in the study of organisms regardless of their size.

back 5

Both the size of the organism studied and the techniques employed in the study of organisms.

front 6

The concept that living organisms arise from nonliving material is called

back 6

Spontaneous generation

front 7

__was the first to observe and accurately describe microorganisms.

back 7

van Leeuwenhoek

front 8

Redi’s experiment included both a dish of meat covered with cheesecloth and an uncovered dish of meat to show

A. maggots did not appear under any circumstances

B. spontaneous generation would occur if the air could get to the meat

C. that maggots would only appear if flies had access to the meat

D. that bacteria would not grow on the meat

E. air was necessary to produce maggots

back 8

that maggots would only appear if flies had access to the meat

front 9

The first step in using Koch’s method for determining the organism causing disease is to:

A. Observe the organism in sick animals, but not healthy ones

B. Isolate the different organisms in sick animals, and inject them into healthy subjects

C. Identify the species of the organisms infecting sick animals

D. Grow each organism in pure culture

E. Observe the same disease in animals injected with the purified organism

back 9

Observe the organism in sick animals, but not healthy ones

front 10

True or False: Although developed over 100 years ago, Koch's postulates continue to be used successfully in all known human infectious diseases.

back 10

False

front 11

True or False: All microorganisms can be grown on nutrient agar plates

back 11

False

front 12

If you are working in a laboratory and wish to create a pure culture of a virus, which of the following would best allow you to do this?

A. A nutrient agar plate with LB media.

B. A tube of nutrient media broth.

C. A flask of living cells and nutrient media.

D. All of the above would allow you to do this.

E. None of the above as viruses cannot be cultured in the lab.

back 12

A flask of living cells and nutrient media.

front 13

The branch of microbiology that deals with the mechanisms by which the human body protects itself from disease-causing organisms is called _____

back 13

Immunology

front 14

__ microbiology involves the use of microorganisms to make products such as antibiotics, vaccines, steroids, alcohols, vitamins, amino acids, and enzymes.

back 14

Industrial microbiology

front 15

True or False: . When looking through a compound microscope at an image, the visual image seen is actually upside down

back 15

True

front 16

18. What is the purpose of a lens in a microscope?

A. To focus light rays at a specific place called the focal point.

B. To bend and refract light waves away from a specimen on a slide.

C. To provide a light source under a specimen.

D. To improve resolution of the image through adjustments of the stage.

E. To measure the ability to gather light and resolve fine specimen detail at a fixed object distance

back 16

A. To focus light rays at a specific place called the focal point.

front 17

The _____________ is a measure of how greatly a substance slows the velocity of light.

A. reflective index

B. condensing power

C. refractive index

D. resolving powe

rE. condenser

back 17

refractive index

front 18

Which of the following would provide the greatest amount of resolution in a microscope?

A. A low power magnification

B. A larger numerical aperture

C. A shorter focal length

D. B and C together would give the best resolution

E. All of the abovetogetherwould give the best resolution possible

back 18

Both a larger numerical aperture and a shorter focal length

front 19

In______________ the visual image is formed by light reflected or refracted by the specimen and is used to view a bright image of the object against a dark background

back 19

dark-field microscopy

front 20

In ______________ the visual image is formed by converting differences in refractive index/cell density into detected variations in light intensity.

back 20

Phase-contrast microscopy

front 21

_____________ produces a magnification of 100 million times and can view atoms on a solid surface.

back 21

Scanning probe microscopy

front 22

True or False: An advantage of phase contrast microscopy is that living cells do not have to be killed with stains in order to be visualized.

back 22

True

front 23

Which of the following is NOT true about SEM (scanning electron microscopy)

A. Uses electrons excited from the surface of a specimen to create detailed image

B. Can create 3-D images

C. Creates images using the back scatter of electrons or by capturing secondary electrons from the surface of the object to be visualized.

D. Images produced by SEM gain colors based on the fluorescent indexes of electrons

E. All of the above are true about SEM.

back 23

Images produced by SEM gain colors based on the fluorescent indexes of electrons

front 24

True or False: "Microbiologists study a variety of organisms, but all are considered either Bacteria or Archaea"

back 24

False

front 25

A mis-folded protein

back 25

A prion

front 26

Cells with a relatively complex morphology that have a true membrane-delimited nucleus are called

back 26

eukaryotes

front 27

The concept that human and animal diseases are caused by microorganisms is called the

back 27

Germ Theory

front 28

Who of the following developed a set of criteria that could be used to establish a causative link between a particular microorganism and a particular disease?

Fracastoro

Koch

Pasteur

Lister

back 28

Koch

front 29

Who of the following was the first to observe and accurately describe microorganisms?

van Leeuwenhoek

Koch

Semmelweiss

Lister

back 29

van Leeuwenhoek

front 30

Who of the following provided the evidence needed to discredit the concept of spontaneous generation?

Pasteur Koch Semmelweiss Lister

back 30

Pasteur

front 31

True or False: The relationship between specific bacteria and specific diseases was first demonstrated by Koch.

back 31

True

front 32

Whose work on spontaneous generation first demonstrated the existence of a very heat-resistant form of bacteria that are called endospores?

Schwann Redi Tyndall Pasteur

back 32

Tyndall

front 33

Antiseptic surgery was pioneered by

Pasteur Jenner Lister Kitasato

back 33

Lister

front 34

True or False: "Although developed over 100 years ago, Koch's postulates continue to be used successfully in all known human infectious diseases. "

back 34

False

front 35

True or False: Agar is used as a solidifying agent for microbiological media because it is not readily digested by most microorganisms.

back 35

True

front 36

True or False: All microorganisms can be grown on nutrient agar plates.

back 36

False

front 37

"If you are working in a laboratory and wish to create a pure culture of a virus, which of the following would best allow you to do this?"

A nutrient agar plate with LB media.

A tube of nutrient media broth.

A flask of living cells and nutrient media.

All of the above would allow you to do this.

back 37

A flask of living cells and nutrient media.

front 38

The branch of microbiology that deals with diseases of humans and animals is called __________ microbiology.

back 38

Medical microbiology

front 39

The branch of microbiology that deals with the mechanisms by which the human body protects itself from disease-causing organisms is called __________.

back 39

Immunology

front 40

__________ microbiologists monitor community food establishments and water supplies in order to control the spread of communicable diseases.

back 40

Public Health

front 41

The branch of microbiology that studies the relationship between microorganisms and their habitats is called __________.

back 41

Microbial ecology

front 42

"__________ microbiology involves the use of microorganisms to make products such as antibiotics, vaccines, steroids, alcohols, vitamins, amino acids, and enzymes. "

back 42

Industrial

front 43

"In an outbreak of the bacteria E. coli, who would be the most likely type of microbiologist to respond to the outbreak?"

An immunologist

An industrial microbiologist

A public health microbiologist

A molecular geneticis

back 43

A public health microbiologist

front 44

. Which of the following external structures are found in archaea but not bacteria?

A. pili

B. flagella

C. hami

D. peptidoglycan

E. All of the above are found in both bacteria and archaea

back 44

hami

front 45

Which of the following statements about archaeal plasma membranes is TRUE?

A. The plasma membrane is always a lipid bilayer that lacks integral membrane proteins.

B. The plasma membrane must be a lipid bilayer with embedded proteins.

C. The plasma membrane contains peptidoglycan.

D. The plasma membrane can be a lipid monolayer.

E. None of the above statements are true.

back 45

The plasma membrane can be a lipid monolayer.

front 46

Diglycerol tetraether lipids __________.

A. are a characteristic feature of thermophilicbacteria

B. tend to make the membrane less rigid

C. are found in bothbacteria and archaeaD. form typical bilayer membranes in thermophilic eukaryotes

E. are found in thermophilicarchaea

back 46

are found in thermophilicarchaea

front 47

The plasma membrane of eukaryotes contains all of the following except

A. sterols

B. phosphoglycerides

C. sphingolipids

D. peptidoglycan

E. cholesterol

back 47

peptidoglycan

front 48

How do eukaryotic cells move large particles out of a cell?

A. endocytosis

B. exocytosis

C. phagocytosis

D. pinocytosis

E. group translocation

back 48

exocytosis

front 49

__________ is used for the breakdown and recycling of cytoplasmic componentsin eukaryotic cells.

A. Receptor mediated endocytosis

B. Formation of clathrin coated pits

C. Macroautophagy

D. Caveolin-dependent endocytosis

E. Macropinocytosis

back 49

Macroautophagy

front 50

Which of the following is FALSE?

A. Histones are found in chromatin.

B. Histones are used to help coil DNA.

C. Histones are proteins.

D. Groups of histones and chromatin form nucleosomes.

E. Histones are found in prokaryotic and eukaryotic microorganisms.

back 50

E. Histones are found in prokaryotic and eukaryotic microorganisms.

front 51

Bacteria have a nucleolus.

A. True

B. False

back 51

False

front 52

Which of the following provides evidence in support of the endosymbiotic hypothesis?

A. Double membrane surrounding mitochondria.

B.Double membrane surrounding chloroplasts.

C. Observation of division by binary fission in mitochondria.

D. A and B only

E. A, B, and C

back 52

Double membrane surrounding mitochondria, Double membrane surrounding chloroplasts, Observation of division by binary fission in mitochondria.

front 53

Mitochondria have their own extra nuclear DNA.

A. True

B. False

back 53

True

front 54

Which of the following statements is FALSE?

A. A virion is complete virus particle.

B. All virions have an envelope.

C. All virions have a nucleocapsid.

D. All virions have a nucleocapsid, but not all have an envelope.

E. Virion capsids are comprised of protomers.

back 54

All virions have an envelope.

front 55

Which of the following is NOT a form of viral genetic material?

A. ds DNA

B. ss DNA

C. ds RNA

D. ss RNA

E. All of the above are forms of viral genetic material.

back 55

All of the above are forms of viral genetic material.

front 56

what capsid shape is represented in the Ebola virus?

back 56

Helical

front 57

A virus that infects bacteria specifically is referred to as a

A. bacteriophage

B. bacterial virion

C. virube

D. V4

E. protease

back 57

bacteriophage

front 58

Unlike bacteria, viruses do not have enzymes.

A. True

B. False

back 58

False

front 59

Why does influenza typically infect lung cells but not brain cells?

A. Due to the preference for macrophages over neuronal cells.

B. Due to host specificity.

C. Due to tissue tropism.

D. Due to host tropism.

E. Due to tissue deselectivity.

back 59

Due to tissue tropism.

front 60

___ viruses typically lyse host cells upon release.

A. Enveloped

B. Non-enveloped

back 60

Non-enveloped

front 61

In the __________, phage DNA inserts into bacterial host genome where it is copied as a cell divides.

A. lytic cycle

B. acute cycle

C. virulent cycle

D. lysogenic cycle

E. archaeal cycle

back 61

lysogenic cycle

front 62

Genes whose expression (or abnormal expression) causes cancer are called ___________.

A. carcinogens

B. progenies

C. cancerous genes

D. prototype genes

E. oncogenes

back 62

oncogenes

front 63

A plaque in virology refers to

A. a complete virus particle

B. anincomplete virus particle

C. a complete and infectious virus particle

D. an incomplete and infectious particle

E. a complete but non-infectious particle

back 63

a complete and infectious virus particle

front 64

The smallest amount of virus needed to cause infection in 50% of exposed host cells or organisms is called the__________.

A. lethal dose

B. infectious dose

C. innocuousdose

D. preferred dose

E. virulence dose

back 64

infectious dose

front 65

____are infectious nucleic acids that encode their own capsid proteins when helped by a helper virus.

A. Satellites

B. Prions

C. Viroids

D. Virions

E. Caspases

back 65

Satellites

front 66

You diagnose a patient with Creutzfeldt-Jakob Disease. Will prescribing antibiotics help this patient with their condition?

A. Yes because it is a bacterialdisease.

B. No because it is a satellite disease.

C. No because it is a viral disease.

D. Yes because it is a viroid disease.

E. No because it is a prion disease

back 66

No because it is a prion disease

front 67

A circular shape in a microorganism is called

back 67

coccus

front 68

Diplo

back 68

Pair

front 69

Strepto

back 69

chain

front 70

Staphylo

back 70

cluster

front 71

A rod-shaped microorganism

back 71

Bacillus

front 72

A curved rod

back 72

Vibrio

front 73

A coil-shaped microogranism

back 73

Spirilla

front 74

Spiral-shaped Microorganism

back 74

Spirochete

front 75

Helical shaped microorganism

back 75

Helicobacter

front 76

These cells lack a true membrane-delimited nucleus

back 76

Prokaryotic cells

front 77

These cells have a membrane-enclosed nucleus, are more complex morphologically, and are usually larger than prokaryotic cells

back 77

Eukaryotic cells

front 78

Usually single-celled, Majority have cell wall with peptidoglycan

Most lack a membrane-bound nucleus

Ubiquitous and some live in extreme environments

back 78

Bacteria

front 79

Distinguished from Bacteria by unique rRNA gene sequences

No peptidoglycan in cell walls

Have unique membrane lipids

Some have unusual metabolic characteristics

Many live in extreme environments

back 79

Archaea

front 80

algae, protozoa, slime molds, and water molds are examples of

back 80

Protists

front 81

Yeast and mold are examples of

back 81

Fungi

front 82

smallest of all microbes

requires host cell to replicate

cause range of diseases, some cancers

back 82

Viruses

front 83

infectious agents composed of RNA

back 83

Viroids

front 84

Infectious proteins

back 84

Prions

front 85

first person to observe and describe microorganisms accurately

back 85

Antony van Leeuwenhoek (1632-1723)

front 86

Belief that life comes from nonliving matter

back 86

Spontaneous Generation

front 87

The idea that living things only come from living things

back 87

Biogenesis

front 88

discredited spontaneous generation when he showed that maggots on decaying meat came from fly eggs and did not arise from the meat its self

back 88

Francesco Redi(1626-1697)

front 89

his experiment: First boiling, then sealing mutton broth in flasks, which resulted in a cloudy broth with microogranisms

back 89

John Needham (1713-1781)

front 90

This scientist first sealed, then boiled mutton broth in flasks, which resulted in no growth of microorganisms

back 90

Lazzaro Spallanzani(1729-1799)

front 91

These two set out to show there were living things in the air

back 91

Franz Shultzeand Theodor Schwann (1836)

front 92

Swan-neck flask’ experiments answered issues of critics about air and heat

back 92

Louis Pasteur (1822-1895)

front 93

The earliest established connection between microorganisms and disease were found in human diseases such as cholera and tuberculosis.

T/F?

back 93

False

front 94

demonstrated microorganisms carried out fermentations and developed the method of pastuerization, helping French wine industry

back 94

Louis Pasteur (1822-1895)

front 95

developed a system of surgery designed to prevent microorganisms from entering wounds as well as methods for treating instruments and surgical dressings

back 95

Joseph Lister

front 96

Established the relationship between Bacillus anthracis and anthrax

back 96

Robert Koch (1843-1910)

front 97

1.The suspected disease agent must be observed in every animal that has the disease, but not in healthy animals

2. The suspected disease agent must be extracted from a diseased animal and grown in a "pure" culture away from other types of cells, i.e., isolated from other possible disease agents

3. The suspected disease agent, which has been grown in the pure culture, must now be injected into healthy animals

4. The healthy animals must become diseased and the suspected disease agent must be observed in their bodies.

back 97

Koch's Postulates

front 98

Are there any limitations to Koch’s postulates?

back 98

Some organisms cannot be grown in pure culture

Using humans in completing the postulates is unethical

front 99

Q. How can limitations to Koch's postulates be overcome?

back 99

Molecular and genetic evidence may replace and overcome these limits

front 100

revolutionized all medicine by discovering the world's first antibiotic, or bacteria killer

back 100

Alexander Fleming (1881 -1955)

front 101

___ is concerned with the impact of microorganisms on agriculture

back 101

Agricultural microbiology

front 102

____ studies metabolic pathways of microorganisms

back 102

Microbial physiology

front 103

____ study the nature of genetic information and how it regulates the development and function of cells and organisms

back 103

Molecular biology

front 104

a measure of how greatly a substance slows the velocity of light

back 104

Refractive index

front 105

Distance between center of lens and focal point

back 105

Focal Length

front 106

Light rays are focused at a specific place called

back 106

focal point

front 107

the ability to distinguish closely spaced points as separate

back 107

Resolution

front 108

Distance between the front surface of lens and surface of cover glass or specimen when it is in sharp focus

back 108

Working distance

front 109

As you increase in magnification power, what happens to the working distance?

back 109

Working distance decreases as you increase in magnification power

front 110

Shorter wavelength = ?

back 110

greater resolution

front 111

a measure of its ability to gather light and resolve fine specimen detail at a fixed object distance

back 111

Numeric aperture

front 112

Why is the highest power objective lens referred to as the “oil immersion” lens?

back 112

Oil must be used to improve the refractive index of light to allow for appropriate resolution of images under the microscope.

front 113

4 cocci in a square

back 113

tetrads

front 114

sarcinae

back 114

cubic configuration of 8 cocci

front 115

network of long, multinucleate filaments

back 115

Mycelium

front 116

Which of the following is not a macromolecule?

1. Carbohydrates

2. Proteins

3. Lipids

4. Nucleic acids

5. Carbon Dioxide

back 116

Carbon Dioxide

front 117

These macromolecules are comprised of carbon, hydrogen, and oxygen in the ratio CH2O

back 117

Carbohydrates

front 118

These are complex macromolecules made from linking together amino acids by peptide bonds

back 118

Proteins

front 119

hydrophobic molecules that include fats, steroids, and phospholipids, and play a critical role in cell membranes

back 119

Lipids

front 120

the storage facilities for all the genetic material in life

back 120

Nucleic Acids

front 121

a sugar + a phosphate + a nitrogenous base = ?

back 121

A nucelotide

front 122

required in trace amounts

back 122

Micronutrients

front 123

Mn, Zn, Co, Mo, Ni, and Cu are examples of

back 123

Micronutrients

front 124

required in relatively large amounts

back 124

Macroelements

front 125

C, H, N, O, P, S, K, Ca, Mg, and Fe are examples of

back 125

Macroelements

front 126

transport mechanism used by Bacteria and Archaea

back 126

Group Translocation

front 127

the movement of molecules from area of high concentration to low concentration

back 127

Diffusion

front 128

diffusion of small, hydrophobic molecules across the membrane

back 128

Passive transport

front 129

the transport of hydrophilic and charged molecules across the membrane

back 129

Facilitated diffusion

front 130

the movement of water across a membrane

back 130

Osmosis

front 131

When a solution is ______ the concentration of a solute is equal on both sides of the cell membrane

back 131

isotonic

front 132

When a solution is _____ the concentration of a solute is greater on the inside of the cell membrane

back 132

hypotonic

front 133

When a solution is ___________ the concentration of a solute is greater outside of the cell membrane

back 133

hypertonic

front 134

_____ requires that a cell expend energy to move molecules across a membrane.

back 134

Active Transport

front 135

a membrane-bound vesicle fuses with the membrane and expels the large molecule

back 135

Exocytosis

front 136

a vesicle forms around a large molecule and brings it into the cell

back 136

Endocytosis

front 137

Rigid structure that lies just outside the cell plasma membrane

Two types based on standard Gram staining

back 137

Peptidoglycan

front 138

stain purple; thick peptidoglycan

back 138

Gram-positive

front 139

stain pink or red; thin peptidoglycan and outer membrane

back 139

Gram-negative

front 140

Outermost layer in the cell envelope

back 140

Glycocalyx

front 141

short, thin, hairlike, proteinaceous appendages (up to 1,000/cell) that can mediate attachment to surfaces, motility, DNA uptake

back 141

Fimbriae

front 142

longer, thicker, and less numerous (1-10/cell)–and are required for conjugation

back 142

Sex pili

front 143

one flagellum

back 143

Monotrichous

front 144

flagella at each end of the cell

back 144

Polar flagellum

front 145

one flagellum at each end of cell

back 145

amphitrichous

front 146

cluster of flagella at one or both ends

back 146

Lophotrichous

front 147

flagella spread over entire surface of cell

back 147

Peritrichous

front 148

Movement toward chemical attractant or away from chemical repellent

back 148

Chemotaxis

front 149

In flagella, counterclockwise (CCW) rotation causes forward motion and is called

back 149

Run

front 150

In flagella, clockwise rotation (CW) disrupts run causing cell to stop is called

back 150

Tumble

front 151

Complex, dormant structure formed by some bacteria and is resistant to numerous environmental conditions

back 151

Endospore

front 152

Why are bacteria haploid?

back 152

They do not undergo sexual reproduction

front 153

Binary fission and budding are examples of what type of reproduction?

back 153

Asexual

front 154

True or False: There is no mitotic phase for bacteria.

back 154

True

front 155

True or False: All bacterial chromosomes are circular

back 155

False. Most bacterial chromosomes are circular

front 156

The site at which replication begins on a bacterial chromosome

back 156

origin of replication

front 157

The site at which replication is terminated, located opposite of the origin on a bacterial chromosome

back 157

Terminus

front 158

A group of proteins needed for DNA synthesis

back 158

Replisome

front 159

formation of cross walls between daughter cells

back 159

Septation

front 160

These microbes grow optimally in the presence of NaCl or other salts at a concentration above about 0.2M

back 160

Halophiles

front 161

These microbes require salt concentrations of 2M and 6.2M

back 161

Extreme Halophiles

front 162

What is the difference between a halotolerant microbe and a halophile?

back 162

“–phile” implies “a love of”. Halotolerant microbes will tolerateNaCl, but not like it

front 163

A chemical compound that releases H+to a solution is a(n)___

back 163

Acid

front 164

A compound that accepts H+and removes them from solution is a(n)__

back 164

Base

front 165

These microbes grow optimally between pH 0 and pH 5.5

back 165

Acidophiles

front 166

These microbes grow optimally between pH 5.5 and pH 7

back 166

Neutrophiles

front 167

These microbes grow optimally between pH 8.5 and pH 11.5

back 167

Alkalophiles

front 168

These microbes grow between 0 degrees C to 20 degrees C

back 168

Psychrophiles

front 169

These microbes grow between 0 degrees C to 35 degrees C

back 169

psychrotrophs

front 170

These microbes grow between 20degrees C to 45 degrees C

back 170

Mesophiles

front 171

These microbes grow between 55 degrees C to 85 degrees C

back 171

Thermophiles

front 172

These microbes grow between 85 degrees C to 113 degrees C

back 172

Hyoperthermophiles

front 173

These microbes grow in presence of atmospheric oxygen (O2) which is 20% O2

back 173

Aerobes

front 174

These microbes require O2

back 174

Obligate aerobe

front 175

These microbes grow in the absence of O2

back 175

Anaerobe

front 176

These microbes usually killed in presence of O2

back 176

Obligate anaerobe

front 177

These microbes do not require O2 but grow better in its presence

back 177

Facultative anaerobes

front 178

These microbes require 2–10% O2

back 178

Microaerophiles

front 179

____ grow with or without O2

back 179

Aerotolerant anaerobes

front 180

important antioxidant defense in nearly all living cells exposed to oxygen; out-competes damaging reactions of superoxide

back 180

Superoxide Dismutase (SOD)

front 181

Ubiquitous in nature in water, these are complex, slime enclosed communities of microbes

back 181

Biofilm

front 182

This media favors the growth of some microorganisms and inhibit growth of others

back 182

Selective media

front 183

This type of media can distinguish between different groups of microorganisms based on their biological characteristics

back 183

Differential media

front 184

True or False: Media can be selective or differential, but not both.

back 184

False. Media can be both selective and differential.

front 185

Which is not a phase in the growth curve?

Lag phase

Communal phase

Exponential(log) phase

Stationary phase

Death phase

back 185

Communal phase

front 186

At 8:00 a.m., a closed flask of sterile broth is inoculated with 1,000 cells. The lag phase lasts 2.5 hours. At 2:00 p.m. the log phase culture has a population of 6 million cells. The mean generation time is approximately_______?

back 186

3.5 hours/12.56 generations = 0.29 hours = ~20 minutes

front 187

What is used to accomplish microbial metabolism?

back 187

ATP

front 188

Chemical work, Transport work, and Mechanical work all make up

back 188

Microbial metabolism

front 189

In metabolism, the synthesis of complex molecules is __

back 189

Chemical work

front 190

In metabolism, take up of nutrients, elimination of wastes, and maintenance of ion balances is ___

back 190

Transport work

front 191

In metabolism, cell motility and movement of structures within cells is ____

back 191

Mechanical work

front 192

the breakdown of organic molecules

back 192

Catabolism

front 193

The synthesis of organic molecules

back 193

Anabolism

front 194

One is electron donating(oxidizing reaction)

One is electron accepting reaction (reducing reaction)

back 194

Oxidation-Reduction (redox) reaction

front 195

NAD, NADP, FAD, FMN, and CoQ are

back 195

electron carriers

front 196

____ speed up the rate at which a reaction proceeds toward its final equilibrium

back 196

Enzymes

front 197

protein component of an enzyme

back 197

Apoenzyme

front 198

non-protein component of an enzyme

back 198

Cofactor

front 199

firmly attached non-protein component of an enzyme

back 199

prosthetic group

front 200

loosely attached non-protein component of an enzyme

back 200

coenzyme

front 201

apoenzyme+ cofactor =

back 201

holoenzyme

front 202

Why would an enzyme denature at high temperatures?

back 202

It is a protein. Proteins denature at adversely high temperatures.

front 203

directly competes with binding of substrate to active site

back 203

competitive inhibitor

front 204

binds enzyme at site other than active site and changes enzyme’s shape so that it becomes less active

back 204

Noncompetitive inhibitor

front 205

_____ pathways are enzyme catalyzed reactions whereby the product of one reaction serves as the substrate for the next

back 205

catabolic

front 206

____ pathways function both as catabolic and anabolic pathways

back 206

amphibolic

front 207

What are these three pathways used for?

Embden-Meyerhof pathway

pentose phosphate pathway

Entner-Duodoroffpathway

back 207

Breakdown of glucose to pyruvate

front 208

Also known as glycolysis, this is the most common pathway for glucose degradation to pyruvate in stage two of aerobic respiration and can function with or without O2

back 208

The Embden-Meyerhof Pathway

front 209

True or False: The Embden-Meyerhof Pathway has three phases.

back 209

False; it has only two phases- six-carbon and three-carbon phases

front 210

Used by soil bacteria and a few gram-negative bacteria, this pathway replaces the first phase of the Embden-Meyerhof pathway and yields 1 ATP, 1 NADPH, and 1 NADH per glucose molecule

back 210

Entner-Duodoroff pathway

front 211

Also called the hexose monophosphate pathway, this pathway can operate at same time as glycolytic pathway or Entner-Duodoroff pathway

back 211

The Pentose Phosphate Pathway

front 212

Also called citric acid cycle and Kreb’scycle

•Common in aerobic bacteria, free-living protozoa, most algae, and fungi

•Major role is as a source of carbon skeletons for use in biosynthesis

•Summary: for each acetyl-CoA molecule oxidized, generate 2 molecules of CO2, 3 molecules of NADH, one FADH2, and one GTP

back 212

Tricarboxylic Acid Cycle

front 213

True or False: All electron transport chains are found in the mitochondrial inner membrane.

back 213

False. Bacteria and Archaea do not have mitochondria

front 214

The most widely accepted hypothesis to explain oxidative phosphorylation

back 214

Chemiosmotic Hypothesis of Oxidative Phosphorylation

front 215

The theoretical maximum total yield of ATP during aerobic respiration is

back 215

38

front 216

Net gain of 146 ATP under aerobic conditions

back 216

Fat catabolism

front 217

____ hydrolyzes protein to amino acids

back 217

Protease

front 218

___ is the removal of amino group from amino acid

back 218

Deamination

front 219

_____ bacteria oxidize ammonia to nitrate

back 219

Nitrifying

front 220

A process of photosynthesis where light energy is trapped and converted to chemical energy

back 220

Light reaction

front 221

A process of photosynthesis where energy produced in the light reactions is used to reduce CO2 and synthesize cell constituents

back 221

Dark reaction

front 222

_________ is the total of all chemical reactions occurring in the cell.

back 222

Metabolism

front 223

Cells carry out three major types of work; which of the following involves nutrient uptake and waste elimination?

Chemical work. Transport work. Mechanical work. None of these.

back 223

Transport work

front 224

Cells carry out three major types of work; which of the following involves energy for cell motility and the movement of structures within cells?

Chemical work. Transport work. Mechanical work. None of these.

back 224

Mechanical work

front 225

The change in __________ is the amount of energy in a system that is available to do work.

back 225

free energy

front 226

The __________ is the electron acceptor in a redox reaction.

back 226

oxidant

front 227

The standard reduction potential of a redox reaction is a measure of the tendency of the __________ to __________ electrons.Ê

back 227

reductant; lose

front 228

True or False: The equilibrium constant for a redox reaction is called the standard reduction potential.

back 228

True

front 229

Which of the following is used as an electron carrier by living organisms?

NAD+

NADP+

ubiquinone

all of the choices

back 229

NAD+, NADP+, and ubiquinnone

front 230

True or False: The electron transport chain is based on the principle that redox couples with more positive reduction potentials will donate electrons to couples with more negative potentials.Ê

back 230

False

front 231

Which of the following is not true about enzymes?

Enzymes are catalysts that speed up reactions.

Enzymes are proteins that can be denatured by changes in pH or temperature.

Enzymes are highly specific for the substrates they react with and catalyze only one or a limited set of possible reactions with those substrates.

All of the choices are true about enzymes

back 231

All of the choices are true about enzymes

front 232

The most specific term usually used to describe a substance in a biological system that increases the rate of a reaction without being permanently changed by the reaction is a(n)

back 232

enzyme

front 233

Enzymes catalyze a reaction byÊ

back 233

decreasing the activation energy of the reaction.

front 234

"The synthesis of ATP from ADP and Pi, when coupled with an exergonic chemical reaction is called __________ phosphorylation. Ê"

back 234

substrate-level

front 235

The net gain of ATP per molecule of glucose metabolized anaerobically via the Embden-Meyerhoff pathway in prokaryotes is Ê

back 235

2

front 236

The net gain of ATP per molecule of glucose metabolized to pyruvate using Entner-Doudoroff pathway is Ê

back 236

1

front 237

The pentose phosphate pathway produces Ê

CO2.

NADPH.

glyceraldehyde

3-phosphate.

all of the choices.

back 237

The pentose phosphate produces all three

front 238

The most common pathway for conversion of glucose to pyruvate is Ê

back 238

Embden-Meyerhoff.

front 239

The pyruvate dehydrogenase complex oxidizes and cleaves pyruvate to form one CO2 and Ê

back 239

acetyl-CoA

front 240

The TCA cycle generates all of the following from each acetyl-CoA molecule oxidized except Ê

three NADH molecules.

two CO2 molecules.

one FADH2 molecule.

two ATP or GTPÊmolecules.

back 240

two ATP or GTPÊmolecules.

front 241

The major function(s) of the TCA cycle is(are) Ê

back 241

energy production and provision of carbon skeletons for biosynthesis of cell components.

front 242

The most commonly accepted hypothesis for the production of ATP that results from electron transport system is called the __________ hypothesis. Ê

back 242

chemiosmotic

front 243

The electron transport systems in eukaryotes and prokaryotes use the same electron carriers. Ê

back 243

false; they use different electron carriers`]

front 244

"In higher eukaryotes, most aerobically generated ATP is produced by Ê"

back 244

a membrane bound proton translocating ATP synthase during oxidative phosphorylation.

front 245

"In aerobic conditions, it takes __________ sugar to produce the same amount of ATP when compared to anaerobic conditions.Ê"

back 245

less

front 246

The number of ATP molecules generated per atom of oxygen that is reduced when electrons are passed from NADH or reduced FAD (FADH) to O2 is called the Ê

back 246

P/O ratio.

front 247

Fermentation does not involve the use of pyruvate and/or other organic molecules as electron acceptors.Ê

back 247

False: fermentation does involve the use of pyruvate and/or other organic molecules as electron acceptors

front 248

Which of the following can be used as electron acceptors during anaerobic respiration?Ê

nitrate sulfate carbon dioxide

back 248

nitrate, sulfate, and carbon dioxide can all be used as electron acceptors

front 249

Fatty acids are metabolized by the __________ pathway. Ê

back 249

beta-oxidation

front 250

"During breakdown of fatty acids, carbons are removed __________ at a time with each turn of the cycle, and two carbon units are released Êas __________. Ê"

back 250

two; acetyl-CoA

front 251

Amino acids are processed first by the removal of the amino group through Ê

back 251

deamination or transamination

front 252

Which of the following may be used as sources of energy by chemolithotrophs?Ê

Hydrogen gas. Reduced nitrogen compounds. Reduced sulfur compounds.

back 252

all three can be used as sources of energy by chemolithotrophs

front 253

Photosynthetic electron transport in cyanobacteria takes place Ê

back 253

on the thylakoid membranes.

front 254

Most bacterial and archaeal cells divide by

back 254

binary fission

front 255

"The cell elongates, replicates its chromosome, and separates the chromosome into the two parts of the cell, and a septum forms at midcell."

back 255

the correct order for binary fission

front 256

The actin-like protein that seems to be involved in determining cell shape is

back 256

MreB

front 257

"During cytokinesis, a critical step in septation is the assembly of the "

back 257

Z ring

front 258

Quorum sensing

is a phenomenon in which bacteria monitor their own population density.

depends on the sensing of signal protein molecules.

plays an important role in formation of biofilms by Pseudomonas aeruginosa.

back 258

All three describe quorum sensing

front 259

Which of the following can be used to isolate pure cultures of bacteria from mixtures?

spread plates streak plates pour plates

back 259

all three are methods to isolate pure cultures or bacteria

front 260

Media containing some ingredients of unknown chemical composition are called __________ media.

back 260

complex

front 261

"Mannitol salt agar (MSA) only allows the growth of halophiles (salt-loving microbes); nonhalophiles will not grow. Among the halophiles, mannitol fermenters will produce acid that turns the pH indicator yellow; mannitol nonfermenters leave the medium red. Onto MSA you inoculate a halophilic mannitol fermenter and a halophilic mannitol nonfermenter. In this case, the medium is acting as (a) __________ medium/"

back 261

differential

front 262

"Mannitol salt agar (MSA) only allows the growth of halophiles (salt-loving microbes). Among the halophiles, mannitol fermenters release acid that turns the pH indicator yellow; mannitol nonfermenters leave the medium red. Onto MSA you inoculate a halophilic mannitol nonfermenter and a nonhalophilic mannitol nonfermenter. Here the medium acts as a __________ medium. "

back 262

selective

front 263

Media in which all components and their concentration are known are called __________ media.

back 263

defined

front 264

The total number of viable microorganisms remains constant in stationary phase because

back 264

either there is a balance between cell division and cell death or there is a cessation of cell division even though the cells may remain metabolically active.

front 265

Cells may enter stationary phase because of

the depletion of an essential nutrient.

a lack of available oxygen.

the accumulation of toxic waste products.

back 265

all three may cause a cell to enter stationary phase

front 266

Which of these methods can be used to determine the number of viable microorganisms in a sample?

Light scattering in a spectrophotometer.

Measuring total cell mass.

Measuring colony forming units per ml.

Counting a known volume of cells in a hemocytometer.

back 266

Measuring colony forming units per ml.

front 267

Microorganisms are most nearly uniform in terms of chemical and physiological properties during __________ phase.

back 267

exponential

front 268

Which of the following is a reason for the occurrence of a lag phase in a bacterial growth curve?

"The cells may be old and depleted of ATP, essential cofactors, and ribosomes that must be synthesized before growth can begin."

The medium may be different from the previous growth medium so that the cells must synthesize new enzymes to use different nutrients.

The organisms may have been injured and require time to recover.

All of these are potential reasons.

back 268

All of these are potential reasons.

front 269

"If all cell components are synthesized at constant rates relative to one another, the culture is said to be in __________ growth; however, if the rates of synthesis of some components change relative to the rates of synthesis of other components, the culture is said to be in __________ growth. "

back 269

balanced; unbalanced

front 270

"Given a log phase bacterial culture with 1 x 10^6 cells per ml and a generation time of 30 minutes, how long does it take the culture to reach a density of 6.4x 10^7 cells per ml? "

back 270

3 hours

front 271

"At 4:00 p.m. a closed flask of sterile broth is inoculated with 10,000 cells. The lag phase lasts 1 hour. At 9:00 p.m. the log phase culture has population of 65 million cells. The approximate number of generations that has occurred is"

back 271

13

front 272

"At 4:00 p.m. a closed flask of sterile broth is inoculated with 10,000 cells. The lag phase lasts 1 hour. At 9:00 p.m. the log phase culture has a population of 65 million cells. The mean generation time is approximately"

back 272

20 minutes

front 273

The Archaea generally lack which of the following that are normally found in gram-negative bacteria?

Outer membrane.

A complex peptidoglycan network.

Lipopolysaccharide.

back 273

archaea lack all three features

front 274

A feature unique to some archaeal plasma membranes is that they may

back 274

consist of a lipid monolayer.

front 275

Because archaeons lack peptidoglycan in their cell walls

back 275

some have an outer layer of complex polysaccharide and some have an outer layer of protein

front 276

Archaeal membranes contain which of the following lipids?

phospholipids sulfolipids glycolipids

back 276

archaea contain all three lipids

front 277

Diglycerol tetraether lipids

back 277

are a characteristic feature of thermophilic Archaea.

front 278

"Which of the following organelles is involved in the modification, packaging, and secretion of materials? "

back 278

golgi apparatus

front 279

Receptor mediated endocytosis

back 279

"depends on formation of clathrin coated pits that pinch off and is used to internalize molecules such as hormones, growth factors, iron, and cholesterol."

front 280

The nucleolus plays a major role in synthesis of

back 280

RNA

front 281

Which is not true of viruses?

They can exist in an intracellular or extracellular phase.

They infect animal and plant cells only.

They replicate only inside host cells. They are acellular.

back 281

They infect animal and plant cells only.

front 282

A complete virus particle is called a

back 282

virion

front 283

The nucleic acids carried by viruses usually consist of

back 283

either DNA or RNA.

front 284

Which of the following is not true of viruses?

Viruses are acellular.

Viruses consist of one or more molecules of DNA or RNA enclosed in a coat of protein and sometimes in other more complex layers.

Viruses can exist in two phases: intracellular and extracellular.

Viruses replicate by binary fission.

back 284

Viruses replicate by binary fission.

front 285

"In an enveloped virus, the part of the virus including the nucleic acid genome and the surrounding protein coat but not the envelope is called the "

back 285

nucleocapsid.

front 286

Viral capsid protein subunits are called

back 286

protomers

front 287

Glycoprotein spikes protruding from the outer surface of viral envelopes function as

back 287

factors that bind to host cells.

front 288

The function of the viral protein coat is to

back 288

protect the viral genetic material and aid in the transfer of the viral genetic material between host cells.

front 289

Most enveloped viruses use the host __________ membrane as their envelope source.

back 289

plasma

front 290

Nonenveloped viruses most often gain access to eukaryotic host cells by

back 290

endocytosis

front 291

Animal viruses have been cultivated in

suitable host animals.

embryonated eggs.

tissue cultures (monolayers of animal cells).

back 291

animal viruses have been cultivated in all three

front 292

A ________ assay is most useful for determining the viability of a viral preparation?

back 292

plaque

front 293

Viroids are of economic significance because they cause disease in

back 293

plants

front 294

Which of the following diseases is (are) caused by prions?

Scrapie. Mad cow disease. Kuru and Creutzfeldt-Jakob Disease.

back 294

all three are prion caused diseases

front 295

Which of the following individuals or groups of individuals demonstrated that the transforming principle was DNA?

" Avery, MacLeod, and McCarty"

Griffith

Hershey and Chase

Watson and Crick

back 295

" Avery, MacLeod, and McCarty"

front 296

The principle of transformation was first demonstrated by which of the following individuals or groups of individuals?

" Avery, MacLeod, and McCarty"

Griffith

Hershey and Chase

Watson and Crick

back 296

Griffith

front 297

"Hershey and Chase demonstrated that when the bacteriophage T2 infected its host cell, the __________ is injected into the host but the __________ remained outside. "

back 297

DNA; protein

front 298

The genetic information in DNA is divided into units called

back 298

genes

front 299

Which of the following is true about the structure of DNA?

Purine and pyrimidine bases are attached to the 1'-carbon of the deoxyribose sugars.

Purine and pyrimidine bases are joined by phosphodiester bonds. "

Adjacent bases are stacked on top of each other, one base pair every 0.34 nm."

all of the above are true.

back 299

all of the above are true about DNA structure

front 300

Which of the following is not a pyrimidine?

adenine cytosine thymine uracil

back 300

adenine

front 301

"The two strands of a DNA molecule are __________; that is, they are oriented in opposite directions. "

back 301

antiparallel

front 302

"When a DNA molecule is replicated, the daughter molecules contain one strand of parental DNA and one strand of newly synthesized DNA; this is called __________ replication. "

back 302

semi-conservative

front 303

The chromosomes of most bacteria are comprised of

back 303

double-stranded circular molecules

front 304

During replication the 2 strands of the DNA molecule are unwound from one another by enzymes called

back 304

helicases

front 305

"The coding sequence in the DNA of __________ is normally continuous; that is, it is not interrupted by noncoding sequences. "

back 305

prokaryotes

front 306

The process by which the base sequence of all or a portion of a DNA molecule is used to direct the synthesis of an RNA molecule is called

back 306

transcription

front 307

The region at which the RNA polymerase binds is the __________ region.

back 307

promoter

front 308

"The transcribed, but not translated, sequence that is immediately upstream of the region that encodes the functional product is called the __________ region. "

back 308

leader

front 309

The unexpressed regions of split genes are called

back 309

introns

front 310

The strand of DNA for a particular gene that is copied by the RNA polymerase to form mRNA is called the __________ stran

back 310

template

front 311

Messenger RNA molecules that direct the synthesis of more than one polypeptide are said to be __________.

back 311

polycistronic

front 312

A consensus sequence in the untranslated leader sequence of a prokaryotic mRNA which serves as a ribosome binding site is called the __________ sequence.

back 312

Shine-Delgarno

front 313

The process by which the base sequence of an RNA molecule is used to direct the synthesis of a protein is called

back 313

translation.

front 314

________ molecules deliver amino acids to ribosomes during translation.

back 314

Transfer RNA (tRNA)

front 315

Which of the following is not a termination codon?

back 315

AUG UAA UAG UGA

front 316

The portion of the tRNA molecule that binds to the codon on the mRNA is called the

back 316

anticodon

front 317

What is the minimum number of aminoacyl-tRNA synthetase enzymes needed to attach amino acids to all the various tRNA molecules?

back 317

20

front 318

In __________ ribosomes can attach to the mRNA and begin translation even though transcription has not been complete

back 318

prokaryotes

front 319

The energy needed for protein synthesis is provided by the hydrolysis of

back 319

ATP and GTP

front 320

___________ in proteins includes alpha-helixes and beta-pleated sheets.

back 320

secondary structures

front 321

What are used to regulate protein folding to minimize the risk of protein mis-folding?

back 321

chaperones

front 322

A gram negative bacterium wishes to secrete a previously-folded virulence factor. Which of the following secretion systems would be used to accomplish this?

back 322

Type II SS