SARS-CoV-2 is predominantly classified as what type of virus?
A. Respiratory virus
B. Enteric virus
C. Neurotropic virus
D. Hepatotropic virus
A. Respiratory virus
Most respiratory viruses first disrupt which airway defense structure?
_____ lining
Ciliary lining
Respiratory viruses damage the ciliary lining mainly to access which cells?
______ cells
Epithelial cells
Do alveoli normally contain cilia or mucus?
Neither present
SARS-CoV-2 carries its genome in which nucleic acid form?
______
RNA
SARS-CoV-2 RNA is wrapped in what outer structure?
A. Protein capsid
B. Peptidoglycan wall
C. Lipid coat
D. Polysaccharide capsule
C. Lipid coat
Compared with many RNA viruses, SARS-CoV-2 has machinery that improves which replication feature?
A. Proofreading
B. Integration
C. Splicing
D. Segmentation
A. Proofreading
SARS-CoV-2 uses proofreading machinery to reduce what during replication?
A. Receptor binding
B. Fusion activity
C. Translation speed
D. Replication mistakes
D. Replication mistakes
SARS-CoV-2 infects target cells when the receptor-binding domain of the virus's _____ protein binds to the Angiotensin-Converting Enzyme 2 (____) host cell receptor.
spike
ACE2
Which viral structure binds ACE2 during SARS-CoV-2 entry?
A. Spike protein
B. Matrix protein
C. Nucleocapsid protein
D. Envelope RNA
A. Spike protein
Alveolar macrophages are normally best described as what?
A. Strongly inflammatory
B. Antibody-secreting
C. Non-inflammatory
D. Ciliated
C. Non-inflammatory
The main baseline job of alveolar macrophages is what?
A. Phagocytosis
B. Antibody transport
C. Mucus secretion
D. Ciliary beating
A. Phagocytosis
Which lymphoid tissue surrounds the nasal respiratory tract?
NALT
Which lymphoid tissue surrounds the bronchial respiratory tract?
BALT
The upper airways are mainly protected by virus-specific antibodies of which class?
IgA
Virus-specific IgA mainly protects which respiratory region?
A. Upper airways
B. Alveolar interstitium
C. Pleural cavity
D. Pulmonary vessels
A. Upper airways
Alveolar epithelium lacks the transport system for which antibody class?
IgA
Which antibody class can diffuse across thin alveolar epithelium?
IgG
During severe SARS-CoV-2 infection, activated ____ can cause ____ injury.
macrophages
lung
Major lung injury in severe COVID is driven partly by which activated cells?
Macrophages
COVID-associated Acute Respiratory Distress Syndrome (ARDS) occurs when which structures become nonfunctional?
A. Bronchioles
B. Nasal turbinates
C. Alveoli
D. Pleura
C. Alveoli
When alveoli become nonfunctional in ARDS, what declines?
Blood _____
Blood oxygen
The process of introducing viral mRNA into cells is called what?
A. Transfection
B. Opsonization
C. Neutralization
D. Agglutination
A. Transfection
COVID vaccine lipid nanoparticles enter cells mainly by what process? _____
Endocytosis
After a vaccine is administered, the lipid nanoparticles containing the mRNA enter the host's cells through a process called endocytosis. Once inside, the mRNA escapes from the endosome and is released directly into the _______
Cytoplasm
Once in the cytoplasm, vaccine mRNA undergoes which process?
A. Translation
B. Replication
C. Integration
D. Recombination
A. Translation
Translation of vaccine mRNA produces which molecules?
A. Viral proteins
B. Viral DNA
C. Whole virions
D. Host antibodies
A. Viral proteins
A transfected cell senses RNA using which immune receptors?
A. Fc receptors
B. Pattern-recognition receptors
C. B-cell receptors
D. CD40 receptors
B. Pattern-recognition receptors
Pattern-recognition receptor sensing of vaccine RNA triggers production of what?
A. Cytokines
B. IgE
C. Bile salts
D. Collagen
A. Cytokines
Cytokines released after vaccine RNA sensing provide what immune cue?
A. Tolerance signal
B. Danger signal
C. Death signal
D. Growth signal
B. Danger signal
Vaccine RNA sensing fires the innate system and which antiviral system?
A. Complement system
B. Interferon system
C. Coagulation system
D. Bile system
B. Interferon system
Which normal mRNA base strongly activates interferon responses?
A. Adenine
B. Cytosine
C. Uridine
D. Guanine
C. Uridine
To reduce harmful interferon activation, mRNA vaccines replace uridine with what?
A. Thymidine
B. Pseudouridine
C. Deoxyuridine
D. Ribothymidine
B. Pseudouridine
In the SARS-CoV-2 spike protein, S1 contains which domain?
A. Fusion domain
B. Receptor-binding domain
C. Polymerase domain
D. Nucleocapsid domain
B. Receptor-binding domain
The S1 receptor-binding domain plugs into which host protein?
A. CD8
B. CD20
C. ACE2
D. CTLA-4
C. ACE2
The S2 portion of spike mainly facilitates what?
A. Fusion
B. Proofreading
C. Transcription
D. Phagocytosis
A. Fusion
By mediating fusion, S2 helps the virus do what?
A. Exit blood
B. Enter cells
C. Bind antibodies
D. Activate complement
B. Enter cells
The SARS-CoV-2 spike (S) protein is a metastable fusion machine that exists in two main conformations: a _____ state on the mature virion and a lower-energy _____ state after host cell entry.
prefusion
postfusion
B cells mainly produce protective antibodies to which spike form?
Prefusion form
COVID-19 vaccination can activate helper and killer T cells through which APC?
Dendritic cell
Dendritic cells activate helper T cells using which MHC class?
A. Class I MHC
B. Class II MHC
C. CD1 molecules
D. Fc receptors
B. Class II MHC
Dendritic cells activate killer T cells using which MHC class?
A. Class I MHC
B. Class II MHC
C. CD40L
D. IgA receptor
A. Class I MHC
During natural respiratory infection, B- and T-cell activation occurs mainly in which tissues?
____ and ____
NALT and BALT
Compared with true COVID-19 infection, an mRNA COVID vaccine causes what regarding viral replication?
No viral replication
After mRNA COVID vaccination, which cells make spike protein?
A. All respiratory epithelial cells
B. Only infected alveolar cells
C. Cells taking up mRNA
D. Circulating plasma cells
C. Cells taking up mRNA
After mRNA COVID vaccination, spike protein production occurs mainly where?
A. NALT and BALT
B. Injection site
C. Alveolar spaces
D. Thymic cortex
B. Injection site
During real SARS-CoV-2 infection, viral replication occurs because what is present?
A. Complete infectious virus
B. Isolated spike mRNA
C. Purified spike protein
D. Neutralizing antibody
A. Complete infectious virus
During respiratory infection, B cells in the respiratory tract mainly produce which antibody?
IgA
Respiratory-tract IgA is favored because the airway is which type of surface?
A. Serosal surface
B. Mucosal surface
C. Synovial surface
D. Endocrine surface
B. Mucosal surface
After arm-cell transfection during vaccination, the local immune response mainly produces which antibody?
IgG
Compared with respiratory infection, injected vaccination is less biased toward which antibody?
IgA
For most vaccines, which blood measurement reliably predicts protection?
A. Pathogen-specific antibodies
B. Total eosinophil count
C. Serum complement only
D. Free viral RNA
A. Pathogen-specific antibodies
Besides neutralizing antibodies, vaccine effectiveness can be assessed using which antibody type?
A. Autoantibodies
B. Rheumatoid factor
C. Non-neutralizing antibodies
D. IgE antibodies
C. Non-neutralizing antibodies
Another marker of vaccine effectiveness is the level of which cells?
A. Virus-specific memory T cells
B. Naive eosinophils
C. Resting mast cells
D. Immature neutrophils
A. Virus-specific memory T cells
After prior COVID infection or vaccination, reinfection is still what?
A. Impossible
B. Possible
C. Always fatal
D. Always silent
B. Possible
Prior immunity helps against COVID reinfection mainly by allowing what?
A. Faster immune reaction
B. Complete viral invisibility
C. No antibody response
D. Delayed T-cell activation
A. Faster immune reaction
After reinfection, prior immunity helps limit which viral process?
A. Viral proofreading
B. Viral proliferation
C. Viral endocytosis
D. Viral translation
B. Viral proliferation
During first pathogen exposure, B cells recognize which antigenic structure?
A. Fc region
B. MHC molecule
C. Epitope
D. CD3 complex
C. Epitope
An epitope is best described as what?
A. Whole pathogen
B. Antigenic determinant
C. Antibody Fc region
D. T-cell cytokine
B. Antigenic determinant
Early B-cell activation recognizes an epitope and its variants. This response is called what?
_____
Polyclonal
After somatic hypermutation, long-lived plasma B cells bind the epitope with what change?
A. Lower affinity
B. No affinity
C. Random tolerance
D. Higher affinity
D. Higher affinity
Somatic hypermutation improves long-lived plasma cells by increasing what?
A. Antibody tightness
B. Viral replication
C. MHC deletion
D. T-cell anergy
A. Antibody tightness
According to these notes, central memory B cells do not undergo what process?
_____ _____
Somatic hypermutation
Central memory B cells remain broad because they stay what?
A. Monoclonal
B. Anergic
C. Polyclonal
D. Hypermutated
C. Polyclonal
Polyclonal central memory B cells help protect against pathogens that do what?
A. Mutate their epitopes
B. Stop replicating permanently
C. Lose all proteins
D. Become noninfectious
A. Mutate their epitopes
Which cells can produce antibodies against rapidly mutating pathogens?
A. Plasma eosinophils
B. Central memory B cells
C. Naive neutrophils
D. Resting mast cells
B. Central memory B cells
Upper-airway protection includes IgA and which clearance mechanism?
A. Mucus elevator
B. Complement pore
C. Fas deletion
D. CTL exhaustion
A. Mucus elevator
Which immune cells also protect the upper airway from infection?
A. Basophils
B. Platelets
C. Alveolar macrophages
D. Plasma fibroblasts
C. Alveolar macrophages
Which combination best protects the upper airway?
A. IgA, mucus elevator, macrophages
B. IgE, bile, neutrophils
C. IgM, cilia loss, basophils
D. IgG, thymus, eosinophils
A. IgA, mucus elevator, macrophages
Which response best explains faster control after COVID reinfection?
A. Primary immune delay
B. Memory immune response
C. No antigen recognition
D. Failed B-cell activation
B. Memory immune response