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BIO 16 MT

front 1

What is the basic structure of a microtubule?

back 1

dimer (beta-tubulin and alpha-tubulin)

both hold GTP

front 2

What does beta-tubulin do that alpha tubulin can't?

back 2

can hydrolyze GTP

front 3

How many protofilaments does one microtubule have?

back 3

13 - makes a spiral circle

front 4

Where does most growth and shrinkage occur on a microtubule? Why?

back 4

on the plus end, because the minus end is anchored in the nucleator

front 5

What does rescue microtubules mean?

back 5

growth - tubulins added

front 6

what does catastrophe mean?

back 6

Shrinkage

front 7

What is dynamic instability?

back 7

switching between catastrophe and rescue (same idea as treadmilling)

activity only on the plus end bc the minus end is anchored

front 8

Why do we want dynamic instability?

back 8

to be able to take off and take action by growing or shrinking only on ONE END

front 9

How do we know when to undergo dynamic instability?

back 9

when the rate of GTP hydrolysis is slower than the rate of tubulin addition

front 10

What form are dimers added and lost?

back 10

added in GTP form (stable)

Lost in the GDP form (less stable)

these changes are done by beta-tubulin only

front 11

What is the structure of the microtubules when GTP bound and GDP bound?

back 11

GTP - straight

GDP - bent (trying to change conformation)

front 12

What are the 2 drugs that destabilize microtubules?

back 12

Colchicine and Nocodozole

- favor catastrophe

front 13

What is the 1 drug that stabilizes microtubules?

back 13

Taxol (cancer therapy)

front 14

Why would it be bad if cells cant undergo catastrophe on the plus end?

back 14

inhibits cell division - spindle shortens MT by pulling during anaphase, if catastrophe cant occur no depolymerization

front 15

What are microtubules nucleated by?

back 15

gamma TuRC (ring complex)

front 16

what end of the microtubule does nucleation occur?

back 16

on the minus end

front 17

How many gamma TuSC does it take to form a ring complex?

back 17

7

front 18

What is the gamma tubulin ration with gamma TuSC and gamma TuRC?

back 18

2 gamma tubulin for every 1 gamma TuSC

7 gamma TuSC for every 1 gamma TuRC

front 19

what is the total number of protofilaments created?

back 19

14 but we 13 used because one is stacked on top of each other to create the spiral

front 20

What region does the gamma TuRC perform nucleation?

back 20

MTOC

front 21

What is the MTOC for animals?

back 21

centrosome

front 22

What is the centrosome structure?

back 22

has 2 centrioles inside pericentriolar material (jelly) with gamma tubulin rings surrounding (nucleating sites)

front 23

What is the major function of microtubules

back 23

determine position of the internal organelles

centrosome radiates MT in all directions so it can find the center of the cell (puts nucleus in middle and rest of organelles follow position)

acts as a highway for transport vesicles to move from one organelle to another

front 24

How many triplets are centrioles made out of?

back 24

9

one has 13 protofilaments and 2 other couple on and share

front 25

What are the functions of the different lengths of arms on a microtubule?

back 25

MAP2 - long arms (more stable)- makes sure nothing can touch MT, can only get as close as the length of the arm

tau - short arms (less stable) short binding - MT closer to each other

front 26

why is there a difference between the microtubule protein arms

back 26

MAP - determines spacing - farther (stable binding)

tau - closer spacing short binding

front 27

What are the 2 specific MAPs proteins that affect the rate of polymeriation at the plus end?

back 27

Kinesin-13 = favors catastrophe (destabilization - peels off tubulin dimers)

XMAP215 = favors rescue (can pick up dimers and bring them to the plus end to be added)

front 28

What is the tubulin sequestering proteins and its function?

back 28

stathmin - binds tubulin dimer and keeps it away from the plus end to be added (stops the growth of the plus end)

front 29

What is the microtubule severing protein?

back 29

katanin - cuts off and chops MT into pieces (can be used to form the spindle in cell division)

front 30

What are the 2 motor proteins for MT and their function?

back 30

kinesin - walk toward the plus end

dysein - walk toward the minus end

front 31

How does cAMP impact the direction of movement for the kinesin?

back 31

high levels of cAMP activates kinesins to move pigments toward the plus end of the MT to periphery

Anteriograde movement through the secretory pathway

front 32

How does cAMP impact the direction of movement for the dynein?

back 32

low levels of cAMP moves pigments to the minus end of the MT (all clump together in the middle)

Retrograde movement

front 33

What is the mechanism for kinesins?

back 33

1. hold cargo and head binds to B-tubulins on the MT surface (back head ATP front head ADP)

2. the back head is hydrolyzed, releasing inorganic phosphate

3. front head trades and bind ATP tightly and back head swings forward

4. REPEAT

front 34

How is the dyneins binded to MT?

back 34

MT bound to dynein bound to dynactin complex to the vesicle (cargo)

REQUIRES ADAPTER COMPLEX (dynactin)

front 35

cilia

back 35

movement of fluid, sweeping motion, stays static

front 36

where could cilia be found

back 36

in lungs (gets rid of fluid and dust), trachea, inner ear (perceive sound)

front 37

flagella

back 37

cell movement, uses locomotion, like a sperm cell - swims

front 38

What are cilia and flagella built out of?

back 38

have 9 fold symmetry (9 doublets) with 2 single doublets

9+2 arrangment

front 39

What causes the flagella to have a whipping movement?

back 39

cross-linking proteins, limit sliding of MT doublets so instead of sliding up the MT bend on one side to another which creates a whipping movement

front 40

What causes the flagella to have a sliding movement?

back 40

dynein on MT doublets walk along each other either up or down which creates a sliding movement

one side is fixed, the other is dynamic